Quality & Testing

How to Read a Certificate of Analysis

A Certificate of Analysis is a batch-specific summary of tests, specifications and reported results. Its value depends on traceability, suitable methods, clear acceptance criteria and an authentic link to the material supplied.

Published
20 July 2026
Last reviewed
20 July 2026
Reading time
8 minutes
Author
PurePeps Editorial Team

What is a Certificate of Analysis?

A Certificate of Analysis, commonly abbreviated to COA, is a document summarising analytical results for a stated material or batch.

A useful COA should identify:

  • what was tested;
  • which batch or sample was tested;
  • which methods were used;
  • which specifications applied;
  • what results were obtained;
  • whether the material met those specifications;
  • who issued or authorised the document.

A COA is a summary document. It is not necessarily the complete analytical data package.

Supporting material may include:

  • chromatograms;
  • mass spectra;
  • sequence data;
  • calculations;
  • instrument reports;
  • sample-receipt records;
  • laboratory worksheets;
  • method-validation information;
  • chain-of-custody records.

Start with traceability

Before reviewing a purity value, confirm that the document can be traced to the material being assessed.

Check:

FieldWhat to verify
Product nameIt matches the product and chemical form supplied
Batch or lot numberIt matches the vial, container or batch record
Sample identifierThe laboratory's sample ID is present
Report numberThe report has a unique reference
Date receivedThe sample-receipt date is recorded where applicable
Date testedTesting dates are stated
Date issuedThe report issue date is present
LaboratoryThe issuing organisation is clearly identified
Client or submitterThe submitting party is identifiable where appropriate
Document versionAmendments or reissues are controlled
Sign-offAn authorised individual approved the report

A high reported purity cannot compensate for a missing or mismatched batch identifier.

Read specifications and results separately

A specification is the predefined acceptance requirement.

A result is the value obtained during testing.

For example:

  • Specification: purity not less than 98.0%
  • Result: 99.1%
  • Conclusion: passes

The COA should make it clear which number is the acceptance criterion and which number is the measured result.

Watch for vague entries such as:

  • “complies” without stating the underlying specification;
  • “high purity” without a numerical result;
  • “passed” without identifying the test method;
  • “99%” without stating what was measured.

Identity, purity and assay are not interchangeable

Identity

Identity testing evaluates whether the sample is consistent with the intended compound.

Possible techniques include:

  • mass spectrometry;
  • LC-MS;
  • peptide mapping;
  • relative retention time;
  • amino-acid analysis;
  • nuclear magnetic resonance.

The EMA recommends using suitable orthogonal methods to confirm peptide identity rather than relying on one signal alone.[1]

Purity

Purity testing often uses a chromatographic method such as reversed-phase HPLC.

The result commonly describes the relative proportion of detected chromatographic peak area attributed to the main peak under that method.

It does not independently establish the exact amount of peptide in the container.

Assay or content

Assay addresses the amount of the specified substance, usually using a reference standard and a defined calculation.

For peptide materials, the calculation basis matters. Water, residual solvents and counter-ions may affect the difference between total powder mass and peptide-base content.

Examine the method information

A strong COA or supporting report should identify the analytical procedure sufficiently clearly.

For HPLC this may include:

  • method or procedure number;
  • column type;
  • detector wavelength or detector type;
  • mobile phases;
  • gradient;
  • flow rate;
  • injection volume;
  • run time;
  • system-suitability criteria;
  • integration approach.

For mass spectrometry this may include:

  • instrument or technique;
  • ionisation mode;
  • theoretical mass;
  • observed mass;
  • mass tolerance;
  • relevant interpretation.

A result without enough method context can be difficult to evaluate or reproduce.

Look for raw-data support

Where appropriate, check whether the report is supported by:

  • a full chromatogram;
  • clear axis labels;
  • sample identification;
  • acquisition date;
  • peak table;
  • retention times;
  • integrated peak areas;
  • system-suitability information;
  • mass spectrum;
  • theoretical and observed mass values.

A cropped image containing only one peak and a percentage provides less evidence than a traceable analytical report.

Understand the laboratory's accreditation scope

ISO/IEC 17025 accreditation assesses laboratory competence, impartiality and consistent operation.

However, accreditation applies to a defined scope. A laboratory being accredited for one type of test does not automatically mean that every test it offers falls within its accredited scope.

Where accreditation is claimed:

  1. identify the accreditation body;
  2. verify the laboratory;
  3. inspect the current accreditation schedule;
  4. confirm whether the specific method or testing field is included;
  5. check that the accreditation was valid when the test was performed.

UKAS explains that ISO/IEC 17025 accreditation considers areas including staff competence, method suitability, equipment, environment, sample handling and quality assurance.[2]

Do not describe a laboratory report as “UKAS accredited” unless the relevant activity is genuinely covered by its current UKAS scope.

Understand the sampling limitation

A third-party laboratory ordinarily reports on the sample it received.

The result does not automatically prove that every vial in a larger batch is identical unless the sampling and batch-control process supports that conclusion.

Important questions include:

  • Who selected the sample?
  • Was it taken from the finished batch?
  • Was the container sealed?
  • Was chain of custody documented?
  • Does the laboratory sample number link to the supplier batch number?
  • Was the tested material representative of the released stock?

Common warning signs

Treat the following as reasons for further verification:

  • no batch or lot number;
  • batch number does not match the product;
  • no laboratory contact information;
  • no unique report identifier;
  • no testing date;
  • no analytical method;
  • purity shown without a chromatogram;
  • mass identity claimed without observed mass data;
  • generic “99% purity” wording;
  • cropped or low-resolution reports;
  • unexplained editing;
  • inconsistent product names;
  • duplicated reports across different batches;
  • unverifiable accreditation claims;
  • no authorised sign-off;
  • report supplied only as an editable document;
  • acceptance criteria added after results are known.
Key points
  • A COA must be batch-specific and traceable.
  • Specifications and measured results should be clearly separated.
  • Identity, chromatographic purity and content answer different questions.
  • Raw analytical data strengthens the evidence package.
  • Accreditation must be verified against the laboratory's specific scope.
  • Third-party testing applies to the sample received unless broader sampling traceability is documented.

FAQs

Is a COA proof that a product is safe?
No. A COA reports specified analytical results. It cannot establish every possible quality, safety or suitability consideration.
Is an HPLC chromatogram the same as a COA?
No. A chromatogram is analytical output from a chromatography run. A COA is a summary document that may reference or include chromatographic results.
What should match the vial?
At minimum, the product identity and batch or lot number on the documentation should match the material supplied.
Does third-party testing guarantee the whole batch?
It confirms the result for the sample submitted. Wider batch representation depends on the sampling plan, chain of custody and manufacturing controls.
Does ISO 9001 replace ISO/IEC 17025 laboratory accreditation?
No. ISO 9001 concerns quality-management systems and does not replace a technical assessment of laboratory competence under ISO/IEC 17025.

References

  1. 1.
    European Medicines Agency. Guideline on the Development and Manufacture of Synthetic Peptides. 2025.
    Source type: Scientific guideline · Accessed 20 July 2026

    Describes identity, purity, assay, specifications and orthogonal peptide-testing approaches.

    View source (opens in a new tab)
  2. 2.
    United Kingdom Accreditation Service. Laboratory Accreditation — ISO/IEC 17025.
    Source type: Laboratory accreditation guidance · Accessed 20 July 2026

    Explains the role of ISO/IEC 17025 laboratory accreditation.

    View source (opens in a new tab)
  3. 3.
    United Kingdom Accreditation Service. UKAS Accredited vs Non-Accredited Laboratories.
    Source type: Laboratory accreditation guidance · Accessed 20 July 2026

    Explains why quality-system certification is not a substitute for laboratory accreditation.

    View source (opens in a new tab)
  4. 4.
    United States Pharmacopeia. General Chapter <621> Chromatography.
    Source type: Pharmacopoeial standard · Accessed 20 July 2026

    Provides general chromatographic terminology, procedures and system-suitability concepts.

    View source (opens in a new tab)

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Information presented in the PurePeps Research Library is provided for general laboratory, analytical and scientific reference. It does not constitute medical advice, treatment guidance, legal advice or a recommendation for human or veterinary use.